Index

A

AbnormalDetectionModelSelection (class in geochemistrypi.data_mining.process.detect) AbnormalDetectionWorkflowBase (class in geochemistrypi.data_mining.model.detection) activate (ClassificationModelSelection attribute) (RegressionModelSelection attribute) activate() (AbnormalDetectionModelSelection method) (ClusteringModelSelection method) (DecompositionModelSelection method)

AffinityPropagationClustering (class in geochemistrypi.data_mining.model.clustering) Agglomerative (class in geochemistrypi.data_mining.model.clustering) append_feature() (FeatureConstructor method), [1] auto_model (ClassificationWorkflowBase property) (RegressionWorkflowBase property)

B

basic_info() (in module geochemistrypi.data_mining.data.data_readiness), [1] basic_statistic() (in module geochemistrypi.data_mining.plot.statistic_plot) batch_build() (FeatureConstructor method), [1] BayesianRidgeRegression (class in geochemistrypi.data_mining.model.regression)

BIRCHClusteringClustering (class in geochemistrypi.data_mining.model.clustering) BisectingKMeansClustering (class in geochemistrypi.data_mining.model.clustering) bool_input() (in module geochemistrypi.data_mining.data.data_readiness), [1] build() (FeatureConstructor method), [1] build_transform_pipeline() (in module geochemistrypi.data_mining.data.inference)

C

cal_words (FeatureConstructor attribute), [1] chain() (PipelineConstrutor method) check_missing_value() (in module geochemistrypi.data_mining.plot.statistic_plot) check_package() (in module geochemistrypi.data_mining.utils.base) ClassicalLinearRegression (class in geochemistrypi.data_mining.model.regression) ClassificationModelSelection (class in geochemistrypi.data_mining.process.classify) ClassificationWorkflowBase (class in geochemistrypi.data_mining.model.classification) clear_output() (in module geochemistrypi.data_mining.utils.base) cli_pipeline() (in module geochemistrypi.data_mining.cli_pipeline) ClusteringModelSelection (class in geochemistrypi.data_mining.process.cluster) ClusteringWorkflowBase (class in geochemistrypi.data_mining.model.clustering) common_components (ClassificationWorkflowBase attribute) (RegressionWorkflowBase attribute) common_components() (AbnormalDetectionWorkflowBase method) (ClusteringWorkflowBase method) (DecompositionWorkflowBase method) common_function (ClassificationWorkflowBase attribute) (ClusteringWorkflowBase attribute) (DecompositionWorkflowBase attribute) (RegressionWorkflowBase attribute)

copy_files() (in module geochemistrypi.data_mining.utils.base) correlation_plot() (in module geochemistrypi.data_mining.plot.statistic_plot) create_access_token() (in module geochemistrypi.auth.utils) create_geopi_output_dir() (in module geochemistrypi.data_mining.utils.base) create_sub_data_set() (in module geochemistrypi.data_mining.data.data_readiness), [1] customization (BayesianRidgeRegression property) (ClassificationWorkflowBase property) (DecisionTreeClassification property) (DecisionTreeRegression property) (ElasticNetRegression property) (GradientBoostingClassification property) (GradientBoostingRegression property) (LassoRegression property) (RegressionWorkflowBase property) (RidgeRegression property) (SGDClassification property) (SGDRegression property) (SVMClassification property) (SVMRegression property) customize_label() (ClassificationWorkflowBase static method)

D

dash_pipeline() (in module geochemistrypi.data_mining.dash_pipeline) data_mining() (in module geochemistrypi.cli) data_split() (in module geochemistrypi.data_mining.data.data_readiness), [1] Dataset (class in geochemistrypi.data_mining.schemas) Dataset.Config (class in geochemistrypi.data_mining.schemas) dataset_id (Diagram attribute) DBSCANClustering (class in geochemistrypi.data_mining.model.clustering)

DecisionTreeClassification (class in geochemistrypi.data_mining.model.classification) DecisionTreeRegression (class in geochemistrypi.data_mining.model.regression) decode_access_token() (in module geochemistrypi.auth.utils) DecompositionModelSelection (class in geochemistrypi.data_mining.process.decompose) DecompositionWorkflowBase (class in geochemistrypi.data_mining.model.decomposition) Diagram (class in geochemistrypi.data_mining.schemas) Diagram.Config (class in geochemistrypi.data_mining.schemas) distribution_plot() (in module geochemistrypi.data_mining.plot.statistic_plot)

E

ElasticNetRegression (class in geochemistrypi.data_mining.model.regression) email (UserBase attribute)

ExtraTreesClassification (class in geochemistrypi.data_mining.model.classification) ExtraTreesRegression (class in geochemistrypi.data_mining.model.regression)

F

feature_scaler() (in module geochemistrypi.data_mining.data.preprocessing), [1] feature_selector() (in module geochemistrypi.data_mining.data.preprocessing), [1] FeatureConstructor (class in geochemistrypi.data_mining.data.feature_engineering), [1] fit (ClassificationWorkflowBase attribute) (RegressionWorkflowBase attribute)

fit() (AbnormalDetectionWorkflowBase method) (ClusteringWorkflowBase method) (DecompositionWorkflowBase method) fit_transform() (DecompositionWorkflowBase method) float_input() (in module geochemistrypi.data_mining.data.data_readiness), [1]

G

GaussianMixturesClustering (class in geochemistrypi.data_mining.model.clustering) geochemistrypi module geochemistrypi.auth module geochemistrypi.auth.constants module geochemistrypi.auth.schemas module geochemistrypi.auth.utils module geochemistrypi.cli module geochemistrypi.data_mining module geochemistrypi.data_mining.cli_pipeline module geochemistrypi.data_mining.constants module geochemistrypi.data_mining.dash_pipeline module geochemistrypi.data_mining.data module geochemistrypi.data_mining.data.data_readiness module, [1] geochemistrypi.data_mining.data.feature_engineering module, [1] geochemistrypi.data_mining.data.imputation module, [1] geochemistrypi.data_mining.data.inference module geochemistrypi.data_mining.data.preprocessing module, [1] geochemistrypi.data_mining.data.statistic module, [1] geochemistrypi.data_mining.model module geochemistrypi.data_mining.model.classification module geochemistrypi.data_mining.model.clustering module geochemistrypi.data_mining.model.decomposition module geochemistrypi.data_mining.model.detection module geochemistrypi.data_mining.model.func module geochemistrypi.data_mining.model.func.algo_abnormaldetection module geochemistrypi.data_mining.model.func.algo_classification module

geochemistrypi.data_mining.model.func.algo_clustering module geochemistrypi.data_mining.model.func.algo_decomposition module geochemistrypi.data_mining.model.func.algo_regression module geochemistrypi.data_mining.model.regression module geochemistrypi.data_mining.plot module geochemistrypi.data_mining.plot.map_plot module geochemistrypi.data_mining.plot.statistic_plot module geochemistrypi.data_mining.process module geochemistrypi.data_mining.process.classify module geochemistrypi.data_mining.process.cluster module geochemistrypi.data_mining.process.decompose module geochemistrypi.data_mining.process.detect module geochemistrypi.data_mining.process.regress module geochemistrypi.data_mining.schemas module geochemistrypi.data_mining.tests module geochemistrypi.data_mining.tests.test_data module geochemistrypi.data_mining.utils module geochemistrypi.data_mining.utils.base module geochemistrypi.data_mining.utils.exceptions module geochemistrypi.data_mining.utils.mlflow_utils module geochemistrypi.database module get_cluster_centers() (ClusteringWorkflowBase method) get_db() (in module geochemistrypi.database) get_labels() (ClusteringWorkflowBase method) get_os() (in module geochemistrypi.data_mining.utils.base) get_password_hash() (in module geochemistrypi.auth.utils) GradientBoostingClassification (class in geochemistrypi.data_mining.model.classification) GradientBoostingRegression (class in geochemistrypi.data_mining.model.regression)

H

hashed_password (User attribute)

I

id (Dataset attribute) (Diagram attribute) (User attribute) image (Diagram attribute) imputer() (in module geochemistrypi.data_mining.data.imputation), [1] index2name() (FeatureConstructor method), [1]

input_expression() (FeatureConstructor method), [1] input_feature_name() (FeatureConstructor method), [1] install_package() (in module geochemistrypi.data_mining.utils.base) InvalidFileError is_active (UserBase attribute) is_null_value() (in module geochemistrypi.data_mining.plot.statistic_plot) IsolationForestAbnormalDetection (class in geochemistrypi.data_mining.model.detection)

J

json_data (Dataset attribute)

K

KMeansClustering (class in geochemistrypi.data_mining.model.clustering)

KNNClassification (class in geochemistrypi.data_mining.model.classification) KNNRegression (class in geochemistrypi.data_mining.model.regression)

L

LassoRegression (class in geochemistrypi.data_mining.model.regression) letter_map() (FeatureConstructor method), [1] limit_num_input() (in module geochemistrypi.data_mining.data.data_readiness), [1]

log() (in module geochemistrypi.data_mining.utils.base) log_distribution_plot() (in module geochemistrypi.data_mining.plot.statistic_plot) LogisticRegressionClassification (class in geochemistrypi.data_mining.model.classification)

M

main() (in module geochemistrypi.cli) manual_hyper_parameters() (AbnormalDetectionWorkflowBase class method) (AffinityPropagationClustering class method) (Agglomerative class method) (BayesianRidgeRegression class method) (ClassicalLinearRegression class method) (ClassificationWorkflowBase class method) (ClusteringWorkflowBase class method) (DBSCANClustering class method) (DecisionTreeClassification class method) (DecisionTreeRegression class method) (DecompositionWorkflowBase class method) (ElasticNetRegression class method) (ExtraTreesClassification class method) (ExtraTreesRegression class method) (GradientBoostingClassification class method) (GradientBoostingRegression class method) (IsolationForestAbnormalDetection class method) (KMeansClustering class method) (KNNClassification class method) (KNNRegression class method) (LassoRegression class method) (LogisticRegressionClassification class method) (MDSDecomposition class method) (MLPClassification class method) (MLPRegression class method) (PCADecomposition class method) (PolynomialRegression class method) (RandomForestClassification class method) (RandomForestRegression class method) (RegressionWorkflowBase class method) (RidgeRegression class method) (SGDClassification class method) (SGDRegression class method) (SVMClassification class method) (SVMRegression class method) (TSNEDecomposition class method) (XGBoostClassification class method) (XGBoostRegression class method) map_projected_by_basemap() (in module geochemistrypi.data_mining.plot.map_plot) map_projected_by_cartopy() (in module geochemistrypi.data_mining.plot.map_plot) MDSDecomposition (class in geochemistrypi.data_mining.model.decomposition) MeanShiftClustering (class in geochemistrypi.data_mining.model.clustering) MLPClassification (class in geochemistrypi.data_mining.model.classification) MLPRegression (class in geochemistrypi.data_mining.model.regression) model_inference() (in module geochemistrypi.data_mining.data.inference) module geochemistrypi geochemistrypi.auth geochemistrypi.auth.constants geochemistrypi.auth.schemas geochemistrypi.auth.utils geochemistrypi.cli geochemistrypi.data_mining geochemistrypi.data_mining.cli_pipeline geochemistrypi.data_mining.constants geochemistrypi.data_mining.dash_pipeline geochemistrypi.data_mining.data geochemistrypi.data_mining.data.data_readiness, [1] geochemistrypi.data_mining.data.feature_engineering, [1] geochemistrypi.data_mining.data.imputation, [1] geochemistrypi.data_mining.data.inference geochemistrypi.data_mining.data.preprocessing, [1] geochemistrypi.data_mining.data.statistic, [1] geochemistrypi.data_mining.model geochemistrypi.data_mining.model.classification geochemistrypi.data_mining.model.clustering geochemistrypi.data_mining.model.decomposition geochemistrypi.data_mining.model.detection geochemistrypi.data_mining.model.func geochemistrypi.data_mining.model.func.algo_abnormaldetection geochemistrypi.data_mining.model.func.algo_classification geochemistrypi.data_mining.model.func.algo_clustering geochemistrypi.data_mining.model.func.algo_decomposition geochemistrypi.data_mining.model.func.algo_regression geochemistrypi.data_mining.model.regression geochemistrypi.data_mining.plot geochemistrypi.data_mining.plot.map_plot geochemistrypi.data_mining.plot.statistic_plot geochemistrypi.data_mining.process geochemistrypi.data_mining.process.classify geochemistrypi.data_mining.process.cluster geochemistrypi.data_mining.process.decompose geochemistrypi.data_mining.process.detect geochemistrypi.data_mining.process.regress geochemistrypi.data_mining.schemas geochemistrypi.data_mining.tests geochemistrypi.data_mining.tests.test_data geochemistrypi.data_mining.utils geochemistrypi.data_mining.utils.base geochemistrypi.data_mining.utils.exceptions geochemistrypi.data_mining.utils.mlflow_utils geochemistrypi.database

monte_carlo_simulator() (in module geochemistrypi.data_mining.data.statistic), [1]

N

name (AffinityPropagationClustering attribute) (Agglomerative attribute) (BayesianRidgeRegression attribute) (BIRCHClusteringClustering attribute) (BisectingKMeansClustering attribute) (ClassicalLinearRegression attribute) (Dataset attribute) (DBSCANClustering attribute) (DecisionTreeClassification attribute) (DecisionTreeRegression attribute) (Diagram attribute) (ElasticNetRegression attribute) (ExtraTreesClassification attribute) (ExtraTreesRegression attribute) (GaussianMixturesClustering attribute) (GradientBoostingClassification attribute) (GradientBoostingRegression attribute) (IsolationForestAbnormalDetection attribute) (KMeansClustering attribute) (KNNClassification attribute) (KNNRegression attribute) (LassoRegression attribute) (LogisticRegressionClassification attribute) (MDSDecomposition attribute) (MeanShiftClustering attribute) (MLPClassification attribute) (MLPRegression attribute) (OPTICSClustering attribute) (PCADecomposition attribute) (PolynomialRegression attribute) (RandomForestClassification attribute) (RandomForestRegression attribute) (RidgeRegression attribute) (SGDClassification attribute) (SGDRegression attribute) (SpectralClustering attribute) (SVMClassification attribute) (SVMRegression attribute) (TSNEDecomposition attribute) (WardHierarchicalClustering attribute) (XGBoostClassification attribute) (XGBoostRegression attribute)

np2pd() (in module geochemistrypi.data_mining.data.data_readiness), [1] num2option() (in module geochemistrypi.data_mining.data.data_readiness), [1] num_input() (in module geochemistrypi.data_mining.data.data_readiness), [1]

O

oper (FeatureConstructor attribute), [1] OPTICSClustering (class in geochemistrypi.data_mining.model.clustering)

orm_mode (Dataset.Config attribute) (Diagram.Config attribute) (User.Config attribute)

P

password (UserCreate attribute) PCADecomposition (class in geochemistrypi.data_mining.model.decomposition) PipelineConstrutor (class in geochemistrypi.data_mining.data.inference) poly() (PolynomialRegression method) PolynomialRegression (class in geochemistrypi.data_mining.model.regression)

predict (ClassificationWorkflowBase attribute) (RegressionWorkflowBase attribute) predict() (AbnormalDetectionWorkflowBase method) probability_plot() (in module geochemistrypi.data_mining.plot.statistic_plot) process_world_map() (in module geochemistrypi.data_mining.plot.map_plot)

R

RandomForestClassification (class in geochemistrypi.data_mining.model.classification) RandomForestRegression (class in geochemistrypi.data_mining.model.regression) ratio_null_vs_filled() (in module geochemistrypi.data_mining.plot.statistic_plot) ray_tune() (MLPClassification method) (MLPRegression method) (RegressionWorkflowBase method)

read_data() (in module geochemistrypi.data_mining.data.data_readiness), [1] RegressionModelSelection (class in geochemistrypi.data_mining.process.regress) RegressionWorkflowBase (class in geochemistrypi.data_mining.model.regression) retrieve_previous_experiment_id() (in module geochemistrypi.data_mining.utils.mlflow_utils) RidgeRegression (class in geochemistrypi.data_mining.model.regression)

S

sample_balance() (ClassificationWorkflowBase static method) save_data() (in module geochemistrypi.data_mining.utils.base) save_fig() (in module geochemistrypi.data_mining.utils.base) save_model() (in module geochemistrypi.data_mining.utils.base) save_text() (in module geochemistrypi.data_mining.utils.base) select_columns() (in module geochemistrypi.data_mining.data.data_readiness), [1] sequence (Dataset attribute) settings (BayesianRidgeRegression property) (ClassificationWorkflowBase property) (DecisionTreeClassification property) (DecisionTreeRegression property) (ElasticNetRegression property) (ExtraTreesClassification property) (ExtraTreesRegression property) (GradientBoostingClassification property) (GradientBoostingRegression property) (KNNClassification property) (KNNRegression property) (LassoRegression property) (LogisticRegressionClassification property) (RandomForestClassification property) (RandomForestRegression property) (RegressionWorkflowBase property) (RidgeRegression property) (SGDClassification property) (SGDRegression property) (SVMClassification property) (SVMRegression property) (XGBoostClassification property) (XGBoostRegression property) SGDClassification (class in geochemistrypi.data_mining.model.classification) SGDRegression (class in geochemistrypi.data_mining.model.regression) show_data_columns() (in module geochemistrypi.data_mining.data.data_readiness), [1] show_warning() (in module geochemistrypi.data_mining.utils.base) special_components (BayesianRidgeRegression attribute) (DecisionTreeClassification attribute) (DecisionTreeRegression attribute) (ElasticNetRegression attribute) (ExtraTreesClassification attribute) (ExtraTreesRegression attribute) (GradientBoostingClassification attribute) (GradientBoostingRegression attribute) (KNNClassification attribute) (KNNRegression attribute) (LassoRegression attribute) (LogisticRegressionClassification attribute) (MLPClassification attribute) (MLPRegression attribute) (RandomForestClassification attribute) (RandomForestRegression attribute) (RidgeRegression attribute) (SGDClassification attribute) (SGDRegression attribute) (SVMClassification attribute) (SVMRegression attribute) (XGBoostClassification attribute) (XGBoostRegression attribute)

special_components() (AffinityPropagationClustering method) (Agglomerative method) (ClassicalLinearRegression method) (DBSCANClustering method) (IsolationForestAbnormalDetection method) (KMeansClustering method) (MDSDecomposition method) (PCADecomposition method) (PolynomialRegression method) (TSNEDecomposition method) special_function (Agglomerative attribute) (BayesianRidgeRegression attribute) (ClassicalLinearRegression attribute) (DBSCANClustering attribute) (DecisionTreeClassification attribute) (DecisionTreeRegression attribute) (ElasticNetRegression attribute) (ExtraTreesClassification attribute) (ExtraTreesRegression attribute) (GradientBoostingClassification attribute) (GradientBoostingRegression attribute) (KMeansClustering attribute) (KNNClassification attribute) (KNNRegression attribute) (LassoRegression attribute) (LogisticRegressionClassification attribute) (MDSDecomposition attribute) (MLPClassification attribute) (MLPRegression attribute) (PCADecomposition attribute) (PolynomialRegression attribute) (RandomForestClassification attribute) (RandomForestRegression attribute) (RidgeRegression attribute) (SGDClassification attribute) (SGDRegression attribute) (SVMClassification attribute) (SVMRegression attribute) (TSNEDecomposition attribute) (XGBoostClassification attribute) (XGBoostRegression attribute) SpectralClustering (class in geochemistrypi.data_mining.model.clustering) str_input() (in module geochemistrypi.data_mining.data.data_readiness), [1] SVMClassification (class in geochemistrypi.data_mining.model.classification) SVMRegression (class in geochemistrypi.data_mining.model.regression)

T

test_once() (in module geochemistrypi.data_mining.data.statistic), [1] transform() (DecompositionWorkflowBase method)

transformer_dict (PipelineConstrutor property) TSNEDecomposition (class in geochemistrypi.data_mining.model.decomposition) tuple_input() (in module geochemistrypi.data_mining.data.data_readiness), [1]

U

upload_count (UserBase attribute) User (class in geochemistrypi.auth.schemas) User.Config (class in geochemistrypi.auth.schemas)

user_id (Dataset attribute) UserBase (class in geochemistrypi.auth.schemas) UserCreate (class in geochemistrypi.auth.schemas) username (UserBase attribute)

V

verify_password() (in module geochemistrypi.auth.utils)

W

WardHierarchicalClustering (class in geochemistrypi.data_mining.model.clustering)

web_setup() (in module geochemistrypi.cli)

X

XGBoostClassification (class in geochemistrypi.data_mining.model.classification)

XGBoostRegression (class in geochemistrypi.data_mining.model.regression)